BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006F01SP1|AL425561
(991 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1731 1909 0.0
3x_Contig50 131 2e-30
>3x_Contig1731
Length = 24233
Score = 1909 bits (959), Expect = 0.0
Identities = 979/987 (99%), Gaps = 2/987 (0%)
Strand = Plus / Minus
Query: 1 aataatgaatactatctcttttcaaagattgtatgaacatcmtagttgatgaagctgaag 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5290 aataatgaatactatctcttttcaaagattgtatgaacatcctagttgatgaagctgaag 5231
Query: 61 aaatcaaatttggagaaatttgkctttcgtcaacttgtggtatatgcaatttcaaattag 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5230 aaatcaaatttggagaaatttggctttcgtcaacttgtggtatatgcaatttcaaattag 5171
Query: 121 gatgtttactgttgccattattgtccttcccatcctccggatgactgattttgaacgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5170 gatgtttactgttgccattattgtccttcccatcctccggatgactgattttgaacgatg 5111
Query: 181 gtaacggtaccgccacatttggagggaaccgttgcttattgaaggacgatggtccacctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5110 gtaacggtaccgccacatttggagggaaccgttgcttattgaaggacgatggtccacctt 5051
Query: 241 cgattaagctgatcgtatacgaggggttttgctcattgaggaatggtatcaatttcataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5050 cgattaagctgatcgtatacgaggggttttgctcattgaggaatggtatcaatttcataa 4991
Query: 301 tcacagagcaagtctgctgattacaacgatgaagcgttgaatgctcatcgtaaatgacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4990 tcacagagcaagtctgctgattacaacgatgaagcgttgaatgctcatcgtaaatgacaa 4931
Query: 361 tatgakcagaactaagaagcctatctttcaagagcgcctgagtttctatatgcaatgtgg 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4930 tatgatcagaactaagaagcctatctttcaagagcgcctgagtttctatatgcaatgtgg 4871
Query: 421 aaatcaactgatggaaggtggttctaggccttctaagcaacgtactggggaacgaaacat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4870 aaatcaactgatggaaggtggttctaggccttctaagcaacgtactggggaacgaaacat 4811
Query: 481 gaagggtatgaaaatctttcaaagggtatccatgactagttaaatcaagcaaaaacgtag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4810 gaagggtatgaaaatctttcaaagggtatccatgactagttaaatcaagcaaaaacgtag 4751
Query: 541 aatcgtccggtttcaagtctgtaattgccactgtgttcaaacacgagtccctcacttgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4750 aatcgtccggtttcaagtctgtaattgccactgtgttcaaacacgagtccctcacttgag 4691
Query: 601 gttgttccatcaagtccgcgtatatcgaattgggtcgctgccaccgcaaacctttgaccc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4690 gttgttccatcaagtccgcgtatatcgaattgggtcgctgccaccgcaaacctttgaccc 4631
Query: 661 cattaatattaagacagtgactgttaaccgtttccaaacacagtyctgttatgccattwg 720
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 4630 cattaatattaagacagtgactgttaaccgtttccaaacacagtcctgttatgccattag 4571
Query: 721 tgttaaaaccaccgctggtaccgtgctgcccaccattactgccgttcacattagacatgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4570 tgttaaaaccaccgctggtaccgtgctgcccaccattactgccgttcacattagacatgg 4511
Query: 781 caggtgatgcaatctttggtgagctggttgcagtgctcccgctcggcgacatattcatac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4510 caggtgatgcaatctttggtgagctggttgcagtgctcccgctcggcgacatattcatac 4451
Query: 841 tcatttgcattctcatgatgaatgtagtacgaaaaagatcaaaattaggactaaatcaaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4450 tcatttgcattctcatgatgaatgtagtacgaaaaagatcaaaattaggactaaatcaaa 4391
Query: 901 tttagactaacgatggtctctgttct-cgaatacttgaactcttaatttcttctcttatc 959
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4390 tttagactaacgatggtctctgttctccgaatacttgaactcttaatttcttctcttatc 4331
Query: 960 cttctagawaa-ctagactctcaaaaa 985
|||||||| || |||||||||||||||
Sbjct: 4330 cttctagataatctagactctcaaaaa 4304
>3x_Contig50
Length = 999
Score = 131 bits (66), Expect = 2e-30
Identities = 384/492 (78%)
Strand = Plus / Plus
Query: 287 tatcaatttcataatcacagagcaagtctgctgattacaacgatgaagcgttgaatgctc 346
||||||||||||||||||| | ||| ||| || ||||| || || || | || ||| |||
Sbjct: 199 tatcaatttcataatcacacaccaactctcctcattaccaccatcaacccttcaatcctc 258
Query: 347 atcgtaaatgacaatatgakcagaactaagaagcctatctttcaagagcgcctgagtttc 406
||| ||||| ||||||| | || |||||| || |||||||||||| | | ||| | ||||
Sbjct: 259 atcctaaatcacaatatcatcacaactaacaaccctatctttcaacaccccctcactttc 318
Query: 407 tatatgcaatgtggaaatcaactgatggaaggtggttctaggccttctaagcaacgtact 466
||||| |||| | ||||||||| || || | ||||| |||||||| |||| ||||
Sbjct: 319 tatatccaatctccaaatcaactcatccaacctccttctaccccttctaaccaacctact 378
Query: 467 ggggaacgaaacatgaagggtatgaaaatctttcaaagggtatccatgactagttaaatc 526
||| |||||| || ||| | ||||||||||| ||||||| |||| |||||||
Sbjct: 379 ccccaaccaaacatcaaccctatcacaatctttcaaaccctatccatcactacttaaatc 438
Query: 527 aagcaaaaacgtagaatcgtccggtttcaagtctgtaattgccactgtgttcaaacacga 586
|| ||||||| || |||| ||| |||||| ||| ||||| ||||| | ||||||||| |
Sbjct: 439 aaccaaaaacctacaatcctcccctttcaactctctaattcccactctcttcaaacacca 498
Query: 587 gtccctcacttgaggttgttccatcaagtccgcgtatatcgaattgggtcgctgccaccg 646
|||||||||| | || ||||||||| ||| | |||||| |||| || || |||||
Sbjct: 499 ctccctcacttcaccttcttccatcaactccccctatatccaattccctccctcccaccc 558
Query: 647 caaacctttgaccccattaatattaagacagtgactgttaaccgtttccaaacacagtyc 706
||||||||| |||||||||||||| ||| | ||| |||||| |||||||||||| | |
Sbjct: 559 caaacctttcaccccattaatattcccacactcactcttaaccctttccaaacacactcc 618
Query: 707 tgttatgccattwgtgttaaaaccaccgctggtaccgtgctgcccaccattactgccgtt 766
| |||| ||||| | |||| ||||| || |||| | || |||||||||||| || ||
Sbjct: 619 tcttatcccattactcttaaccccacccctcctaccctcctccccaccattactcccctt 678
Query: 767 cacattagacat 778
||||||| ||||
Sbjct: 679 cacattacacat 690
Score = 119 bits (60), Expect = 8e-27
Identities = 135/158 (85%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 829 acatattcatactcatttgcattctcatgatgaatgtagtacgaaaaagatcaaaattag 888
||||||||| |||||| | ||||||||| || ||| || ||| ||||| ||||||||||
Sbjct: 741 acatattcacactcatctccattctcatcatcaatctactaccaaaaacatcaaaattac 800
Query: 889 gactaaatcaaatttagactaacgatggtctctgttct-cgaatacttgaactcttaatt 947
||||||||||||||| |||||| || ||||| |||| | ||||||| |||||||||||
Sbjct: 801 cactaaatcaaatttacactaaccatcctctctcttctcccaatacttcaactcttaatt 860
Query: 948 tcttctcttatccttctagawaa-ctagactctcaaaa 984
|||||||||||||||||| | || ||| ||||||||||
Sbjct: 861 tcttctcttatccttctacataatctacactctcaaaa 898
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6773
Number of Sequences: 1807
Number of extensions: 6773
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 2
length of query: 991
length of database: 10,358,551
effective HSP length: 16
effective length of query: 975
effective length of database: 10,329,639
effective search space: 10071398025
effective search space used: 10071398025
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)